Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015800439.1_cds_XP_016469698.1_6176
CDS Infomation

[gene=LOC107792034] [db_xref=GeneID:107792034] [protein=serine/threonine-protein kinase CDL1-like] [protein_id=XP_016469698.1] [location=complement(join(26372..27166,27262..27653,27729..27918,28020..28216,29359..29461))] [gbkey=CDS]
Sequence

ATGAGTTGCCTCCCTTGTTTTCAGTCTAAGAAAGCCAACGAGCCACCGGAGGACCTCCCG
GTTGCTCGCCCCCTAAATGCTCCATCCCCTCCACCACATTTTGAAAATAACAACTACAAA
CCACCATGTGAAAATGCTAACAAGGTTGAGCGAGCTAGCCCTGTTGAAAATGGGGATAGC
AACGCTAAGACTTTCACATTCCGTGAGCTAGCCAGTGCAACAAAGAACTTTCGGCAAGAA
TGCCTAATAGGAGAAGGTGGATTTGGAAGAGTGTTTAAGGGAACGCTTCAAGGCGGAGAG
GTTGTGGCAGTAAAGCAACTAGACAGAACTGGAACACAAGGAAACAAGGAGTTTCAAGTT
GAAGTCTTAATGCTAACTCTCCTTAACCATCCAAATCTGGTCAATCTCATTGGATATTGT
GCTGATGGAGATCAGAGGATTTTAGTCTATGAATACATGCCAATGGGCTGTCTTGCTGAT
CATCTAATGGACATTAAGGAGGATCAAAAGCCATTAGATTGGCAAAACAGAATGAAGATA
GCCTCAGGTGCAGCTCAAGGACTTGAATATCTACATGATAAGGCCAACCCGCCAATCATT
TATCGCGATCTGAGAACCACCAATATTCTATTAGATCGAGATTTTAATTCTAGACTTTCA
GACTACGGCCTTGCCAAGCTTGCAGGTGGAGGGAATGCATCACACATATCACCAAGGGTA
ATGGGAACCTACGGTTACTGTGCTCCAGAATATGAAAGATCTGGTGAACTCTCTTTCAAG
TCGGATATATATAGTTTTGGAGTTGTTTTACTTGAACTTATTACAGGGCGTCGTGCAGTG
GATACTACAAGGCCTGCAGAGGAGCAAAACTTAGTTGCTTGGGCACAGCCCATTTTCAGG
AATCCAAAAAGGTTCAGAGAAATGGCAGATCCACTTCTCAAAAACAAGTTTCCTGAGAGA
AGTTTGAATCAAGCAGTTGGGGTTGCAGCCATGTGTTTACAAGAAGAGCCGTCAGTCCGC
CCCTTGATCGGTGATGTTGTAGCTGCTATTACTTCCCTTGAAGTGGCTCCACCAGATGAA
CCAATTCCTGAATCTTTGTCTCCTGATAAAGACAGTTCAGATACAGAGATTTCAGATGAT
TACGAGCCAAAGAGTTCAGATAATGAGGATCGAAGCTGCGAAAATGATCAACAAAATGAT
GAAAATGTTCATTATAATAAAGATCATCAAAAAGTTGCTGACAGTGATGAGGATGATAGA
GCAAGTTCTGATTATGGATATGGAAGCACATCAGGATCTTCAGAGAATGAGAACGAAGGA
AGCACGTTTGAACGTGGAGGGATGACAACAAAATCTGGAAAATGGGGTTCCAAATCAAGA
CGCAAAAGCAAGTTAAAATCCTCCTCTCGAACTAACAGCTCAAGTTCAAGACGCAAAAGC
AAGGTTTTAAGAGATGCCACAAAAGACCCTCAAACGAACGATTCATTCAATTTAAGAGAT
GACAAAATCCATTTCAGTTTAAGGCAACAAAGCAGCGTAAAGTCCAAGGATGTAAGTTTT
GGAGCATATTCAAGTCATAGCAGCAATGAGGAATCAGAAAGCGAAAGTAATGGTTTAAAT
CACCAACACCATGTGCAATTAAAACATGAAACCATGCCTCAGAAATTAAAATCCTGA

Peptide Sequence

PEP ID

XP_016469698.1
PEP Infomation

PREDICTED: serine/threonine-protein kinase CDL1-like [Nicotiana tabacum]
Sequence

MSCLPCFQSKKANEPPEDLPVARPLNAPSPPPHFENNNYKPPCENANKVERASPVENGDS
NAKTFTFRELASATKNFRQECLIGEGGFGRVFKGTLQGGEVVAVKQLDRTGTQGNKEFQV
EVLMLTLLNHPNLVNLIGYCADGDQRILVYEYMPMGCLADHLMDIKEDQKPLDWQNRMKI
ASGAAQGLEYLHDKANPPIIYRDLRTTNILLDRDFNSRLSDYGLAKLAGGGNASHISPRV
MGTYGYCAPEYERSGELSFKSDIYSFGVVLLELITGRRAVDTTRPAEEQNLVAWAQPIFR
NPKRFREMADPLLKNKFPERSLNQAVGVAAMCLQEEPSVRPLIGDVVAAITSLEVAPPDE
PIPESLSPDKDSSDTEISDDYEPKSSDNEDRSCENDQQNDENVHYNKDHQKVADSDEDDR
ASSDYGYGSTSGSSENENEGSTFERGGMTTKSGKWGSKSRRKSKLKSSSRTNSSSSRRKS
KVLRDATKDPQTNDSFNLRDDKIHFSLRQQSSVKSKDVSFGAYSSHSSNEESESESNGLN
HQHHVQLKHETMPQKLKS

Transcript Sequence

Gene sequence data has not been registered.